Modeling high-frequency position data of large herbivores with a phase-state model

Understanding the rules and factors that drive the foraging behavior of large herbivores is important to describe their interaction with the landscape at various spatial scales. Some unresolved questions refer to landscape-behavioral interactions that result in oriented or random search in seasonally changing landscapes. Remotely sensed position data indicate that herbivores select local patches of heterogeneous landscapes depending on a complex host of dynamically varying animal and environmental conditions. Since foraging paths consist in successions of relatively short steps, increasing the frequency at which position information is acquired would contribute to entangle the mechanisms resulting in herbivores’ foraging paths. We addressed the question whether herbivores would obtain information at a patch scale that would modify their distribution at a landscape scale based on directed movement or navigation ability. We considered a set of 100,000 high-frequency (1 min intervals) position data of several free-ranging sheep (Ovis aries) at a seasonal-varying range (Patagonian Monte, Argentina) and observed their movements at landscape and at single vegetation patch scales. At a landscape scale, we inspected the spatial co-variation of seasonally varying forage offer and ewes’ movement speeds. At a patch scale, we developed a phase-state (P-S) model of movement cycles based on the occurrence of behavioral phases along foraging paths, and fitted it to the observed daily time series of ewes’ movement speeds. Ewes were preferentially distributed in areas with high forage offer during periods of low forage availability and the reverse occurred during the season of high forage availability. Parameters of the model of activity cycles amenable to control by ewes (duration of speed phases, time elapsed between speed cycles) did not covariate with forage offer, but varied significantly among ewes. The shape (kurtosis) parameter of the model of movement cycles, one which is unlikely under ewes’ control, co-varied significantly with spatial forage offer but did not differ among ewes. We conclude that ewes allocated foraging time along a series of similar movement efforts irrespective of forage availability at small patches. Average forage scarcity at multi-patch level increases the ratio of searching to feeding time. This results in apparent selective time allocation to richer forage areas but does not imply evidence for oriented movement at a landscape scale. We advance a behavioral-based definition of forage patches and discuss its implications in developing foraging theory and models. The P-S model applied to high-frequency position data of large herbivores substantially improves the interpretation of the factors controlling their time allocation in space with respect to previous models of herbivore spatial behavior by discriminating among behavioral-based and environmentally induced components of their movements.     

Spatial extremes of wildfire sizes: Bayesian hierarchical models for extremes

In Portugal, due to the combination of climatological and ecological factors, large wildfires are a constant threat and due to their economic impact, a big policy issue. In order to organize efficient fire fighting capacity and resource management, correct quantification of the risk of large wildfires are needed. In this paper, we quantify the regional risk of large wildfire sizes, by fitting a Generalized Pareto distribution to excesses over a suitably chosen high threshold. Spatio-temporal variations are introduced into the model through model parameters with suitably chosen link functions. The inference on these models are carried using Bayesian Hierarchical Models and Markov chain Monte Carlo methods.     

Effects of Stock Use and Backpackers on Water Quality in Wilderness in Sequoia and Kings Canyon National Parks, USA

During 2010–2011, a study was conducted in Sequoia and Kings Canyon National Parks (SEKI) to evaluate the influence of pack animals (stock) and backpackers on water quality in wilderness lakes and streams. The study had three main components: (1) a synoptic survey of water quality in wilderness areas of the parks, (2) paired water quality sampling above and below several areas with differing types and amounts of visitor use, and (3) intensive monitoring at six sites to document temporal variations in water quality. Data from the synoptic water quality survey indicated that wilderness lakes and streams are dilute and have low nutrient and Escherichia coli concentrations. The synoptic survey sites were categorized as minimal use, backpacker-use, or mixed use (stock and backpackers), depending on the most prevalent type of use upstream from the sampling locations. Sites with mixed use tended to have higher concentrations of most constituents (including E. coli) than those categorized as minimal-use (P ≤ 0.05); concentrations at backpacker-use sites were intermediate. Data from paired-site sampling indicated that E. coli, total coliform, and particulate phosphorus concentrations were greater in streams downstream from mixed-use areas than upstream from those areas (P ≤ 0.05). Paired-site data also indicated few statistically significant differences in nutrient, E. coli, or total coliform concentrations in streams upstream and downstream from backpacker-use areas. The intensive-monitoring data indicated that nutrient and E. coli concentrations normally were low, except during storms, when notable increases in concentrations of E. coli, nutrients, dissolved organic carbon, and turbidity occurred. In summary, results from this study indicate that water quality in SEKI wilderness generally is good, except during storms; and visitor use appears to have a small, but statistically significant influence on stream water quality.     

Optimal Pollution Trading Without Pollution Reductions: A Note1

García, Jorge H., Matthew T. Heberling, and Hale W. Thurston, 2011. Optimal Pollution Trading Without Pollution Reductions: A Note. Journal of the American Water Resources Association (JAWRA) 47(1):52‐58. DOI: 10.1111/j.1752‐1688.2010.00476.x Abstract: Various kinds of water pollution occur in pulses (e.g., agricultural and urban runoff). Ecosystems, such as wetlands, can serve to regulate these pulses and smooth pollution distributions over time. This smoothing reduces total environmental damages when “instantaneous” damages are marginally increasing. This paper introduces a water quality trading model between a farm (a pulse‐pollution source) and a firm (a more steady pollution source) where the object of exchange is the “temporary” retention of runoff as opposed to total runoff reductions. The optimal trading ratio requires firm emissions to be offset by more than a proportional retention of the initial agricultural runoff pulse. The reason is twofold: (1) emissions are steady or constant over time and, in this sense, have relatively larger environmental impact; and (2) certain kinds of runoff management cause delayed environmental damages.     

Using stochastic volatility models to analyse weekly ozone averages in Mexico City

In this paper we make use of some stochastic volatility models to analyse the behaviour of a weekly ozone average measurements series. The models considered here have been used previously in problems related to financial time series. Two models are considered and their parameters are estimated using a Bayesian approach based on Markov chain Monte Carlo (MCMC) methods. Both models are applied to the data provided by the monitoring network of the Metropolitan Area of Mexico City. The selection of the best model for that specific data set is performed using the Deviance Information Criterion and the Conditional Predictive Ordinate method.     

Predator–prey models: an application for the plankton dynamics of lake Geneva

In this paper we present a hierarchical Bayesian analysis for a predator–prey model applied to ecology considering the use of Markov Chain Monte Carlo methods. We consider the introduction of a random effect in the model and the presence of a covariate vector. An application to ecology is considered using a data set related to the plankton dynamics of lake Geneva for the year 1990. We also discuss some aspects of discrimination of the proposed models.     

Baseline levels of PCDD/Fs in soil and herbage samples collected in the vicinity of a new hazardous waste incinerator in Catalonia,Spain

The construction in Constantí (Catalonia, Spain) of a new hazardous waste incinerator (HWI), which is the first one in Spain, finished in 1999. In order to determine the temporal variation (1996–1998) in the concentrations of polychlorinated dibenzo-p-dioxins (PCDDs) and dibenzofurans (PCDFs) in the vicinity of the new HWI, 40 soil and 40 herbage samples were collected (1998) at the same sampling points in which samples had been taken two years before (1996). Each sample was analyzed for PCDDs and PCDFs by high resolution gas chromatography/high resolution mass spectrometry. In the 1996 survey, PCDD/F concentrations in soils ranged from 0.13 to 24.20 ng I-TEQ/kg (d.m.), with median and mean values of 0.67 and 1.68 ng I-TEQ/kg (d.m.), respectively. In the present study, PCDD/F concentrations ranged from 0.12 to 17.20 ng I-TEQ/kg (d.m.), with a median value of 0.75 ng I-TEQ/kg (d.m.) and a mean value of 1.59 ng I-TEQ/kg (d.m.). In turn, in the present study PCDD/F concentrations in vegetation ranged from 0.14 to 2.01 ng I-TEQ/kg (d.m.) (median and mean values: 0.23 and 0.31 ng I-TEQ/kg, respectively), while in the 1996 survey PCDD/F concentrations ranged from 0.24 to 1.22 ng I-TEQ/kg (d.m.) (median and mean values: 0.53 and 0.61 ng I-TEQ/kg, respectively). According to the present (1998) and the previous (1996) levels of PCDD/Fs found in soils and vegetation, the area under potential influence of the new facility shows a rather low contamination by these compounds. The current results should be useful to establish the environmental impact of the HWI.     

Polyhydroxyalkanoates: Biosynthesis from Alternative Carbon Sources and Analytic Methods: A Short Review

Journal of Polymers and the Environment - In recent decades, the global accumulation of plastics and the resulting pollution, as well as the increase in the price of oil, have driven studies aimed...     

Hydrothermal carbonization of biomass and waste: A review

Environmental Chemistry Letters - The replacement of traditional and non-renewable resources by shifting towards renewable-based strategies is a strategy implemented by the European Union...     

Phycobiliproteins extract from Spirulina protects against single-dose cadmium-induced reproductive toxicity in male mice

Environmental Science and Pollution Research - Cadmium (Cd) is known for its many toxic effects on male population such as hypogonadism and fertility difficulties, which are oftenly associated with...